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Bond locations & connectivity

Each kind of chemical bond - covalent, ionic, hydrogen, polar, and so on - is created by a unique kind of electron behavior that, in turn, appears as a uniquely shaped electron density cloud.

This essay describes the characteristic electron density patterns of covalent bonds and ionic bonds. The patterns are useful because they help us understand the different nature of these bonds. They are also useful because, whenever we have adequate electron density, we can use these patterns to assign bond types and locations. (And, as added bonuses, we can often assign bond orders and detect electron delocalization.)

 

Covalent vs. Ionic

Covalent bonds are associated with a build-up of electron density between the bonded atoms. Ionic bonds do not involve electron sharing, and do not show this build-up.

The following salt, disodium fumarate, is held together by a combination of covalent and ionic bonds, so its electron density cloud should reveal both of these characteristic patterns.

disodium fumarate structural formula

Isodensity surfaces representing different regions of the electron density cloud (core, bonding, and molecular) of disodium fumarate are shown below. As you inspect each surface, pay attention to these questions (clicking on a surface will give you a larger image):

  •  What part of the electron density cloud am I looking at? (Is the electron density on this surface relatively high, medium, or low?)
     
  •  Where are the atoms located?
     
  •  Does the surface provide any information about bond location and bond type? (Does it show a build-up of electron density between atoms?)
r
surface
0.4

disodium fumarate 0.4 isodensity surface

core (very hi r (rho)) regions - no connectivity info

0.3

disodium fumarate 0.3 isodensity surface

bonding (high r (rho)) regions - C=O + C=C connectivity info

0.2

disodium fumarate 0.2 isodensity surface

bonding (medium-high r (rho)) regions - all covalent connectivity info

0.1

disodium fumarate 0.1 isodensity surface

bonding (medium r (rho)) regions - all covalent connectivity info

0.01

disodium fumarate 0.01 isodensity surface

molecule (low r (rho)) region - no connectivity info

0.002
SIZE

disodium fumarate 0.002 isodensity surface

molecular (very low r (rho)) region - no connectivity info

The surfaces that mark very high (≥ 0.4) and very low (≤ 0.01) electron density are not informative. The former are located in atom cores, while the latter are located on the molecule's outer fringes. Neither region is affected by electron sharing.

The useful surfaces are those of medium (0.1) to medium-high (0.3) electron density. Some of these surfaces enclose all of the covalent bonds (confirming that electron density builds up between covalently bonded atoms) and show covalent connectivity. Others only enclose selected bonds (see below). None of the surfaces enclose ionic bonds because electron density is much lower in these regions (<< 0.1).

These patterns apply to all molecules. Electron density builds up substantially (> 0.05) in all covalent bonding regions, and is even higher in regions that correspond to multiple bonds (see below). Therefore, inspection of several isodensity surfaces can reveal covalent bonds and ionic bonds alike.

 

Bonus - Bond orders too!

In many cases, you can also obtain bond order information from isodensity surfaces. Compare the following surfaces of disodium fumarate (duplicated from above):

r (rho)
surface
0.3

disodium fumarate 0.3 isodensity surface

bonding (high r (rho)) regions - only multiple bonds detected

0.1

disodium fumarate 0.1 isodensity surface

bonding (medium r (rho)) regions - all covalent bonds detected

The degree of electron density build-up depends on the bond order. Electron density builds up more (≥ 0.3) where there are multiple bonds, and to a lesser degree (≥ 0.1) where there are only single bonds.

Unfortunately, using isodensity surfaces to assign bond orders is a tricky business. A single surface (for example, 0.1) may not show much, while another surface (0.3) might be very revealing. It is also difficult to anticipate what values of r should be looked at, so it is necessary to study a range (0.1 - 0.3 is usually sufficient).

Bottom-line: You can use electron density to compare bond orders between the same kind of atoms, say, one CO bond with another CO bond (but not CO vs. CN). If you strike it lucky and find an isodensity surface that shows you two bonds are different, then they really are! But be cautious. It might be hard to say how different they are. It is always best to combine electron density information with other information, like bond distance, bond angle, and electrostatic potential.

 

Extra special bonus - Delocalized bonds!!

If you take one more look at the 0.3 isodensity surface (duplicated below), you will see that it has the same shape in all four CO bonding regions. The other isodensity surfaces also look identical in these regions. Taken together, these surfaces show that the electron density cloud is roughly the same in each CO bonding region, and all of the CO bonds are equivalent.

r (rho)
surface
0.3

disodium fumarate 0.3 isodensity surface

bonding (high r (rho)) regions - only multiple bonds detected

It is impossible to draw a Lewis structure that contains 4 identical CO bonds and also gives every atom an ideal gas electron configuration (Lewis octet). Therefore, we must conclude that the fumarate dianion is a resonance hybrid and the CO bonds are delocalized partial double bonds.

This finding demonstrates another interesting aspect of electron density. Unlike Lewis' theory, which relies on an exceedingly simplistic view of electron sharing, quantum mechanics (and Mother Nature) admit a continuous range of electron-sharing possibilities and the entire range is reveals itself through the electron density cloud.

 

Review problems

#1. Use these isodensity surfaces to answer questions about LiKSO4 (click on each surface for a larger image).

0.1
0.2
0.3
LiKSO4 0.1 isodensity LiKSO4 0.2 isodensity LiKSO4 0.3 isodensity

a. How many ions are present in this compound?

answer

 

b. These surfaces establish the connectivity of KLiSO4. Draw its Lewis structure.

answer

 

#2. Use these isodensity surfaces to answer questions about N,N-dimethylimidazolium chloride, C5H9ClN2 (click on each surface for a larger image).

0.1
0.2
0.3
Me2imidazolium chloride 0.1 isodensity Me2imidazolium chloride 0.2 isodensity Me2imidazolium chloride 0.3 isodensity

a. How many ions are present in this compound?

answer

 

b. These surfaces establish the connectivity of this compound and some of its bond orders. Draw its Lewis structure. Note: if this compound looks like a resonance hybrid, draw all important resonance forms.

answer